Well I got my Jeep back last night finally. The rental car a jetta seriously, I drove the thing home walked in took my wifes keys and left with her car LOL. Well it seems that the water leak is fixed they cleaned up the other guys mess and put my boot on correctly. All the dealer guy knew was they found a spot where it was coming in from the A pillar big shock there man. So my guess is it was the TSB for the secondary door seal which is the first thing he said he fixed. I don't think this guy could fix a sandwich. It rained pretty hard and my floor board stayed dry so we will see how goes. Either way I don't think I will bring it back to the dealer. I don't like crappy work done even if it is free.